1.3 Data Selectivity
К оглавлению1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 1617 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33
34 35 36 37 38 39 40 41
Raw data are exchanged between and among the various subsystems and
processes of the organism. However, not every piece of data is relevant
or useful to a subsystem or process. There must be some property of the
components of an organism that allows for discrimination or parsing
between relevant and irrelevant data. Once a piece of data has been selected
as useful for a process, it becomes informative for the process; the selected
data ceases to be potentially useful and becomes actual information. Raw
data have the potential to become information, and information can be
understood as data of the kind that have been selected for as useful for a
process or system in an organism. Thus, there are actually three categories
of data, namely, (1) data that are not of the kind that are either useful or
not useful for a subsystem or process, (2) data that are of the kind that are
not useful for a subsystem or process, and (3) data that are of the kind that
are useful for a subsystem or process, namely, information.
The term information can be defi ned in different ways, usually depending
upon the intended goals of a particular intellectual discipline or methodology
employed. Some molecular biologists use the term in the spirit of
Shannon (1948) and Weaver & Shannon’s (1949) information theory to
describe any general communicative process that selects one or more objects
from a set of objects (cf. Sacco, Copes, Sloyer, & Stark, 1988; Schneider,
1986; also the articles in Terzis & Arp, 2008). However, a few more conditions
should be added to this defi nition in order to make it more appropriate
for our discussion.
First, given the molecular biologist’s defi nition, I think it is correct to
say that information entails a selective process. As has been noted already,
it is the selective capacity of the components of an organism that enables
raw data to be considered as information. Consider that there are a multitude
of activities being performed by organelles within the eukaryotic cell.
The plasma membrane is the phospholipid bilayer that acts as the cell’s
shell. In the processes of endocytosis and exocytosis, materials are moved
into and out of the cell through the plasma membrane. However, not just
any material is allowed into or out of the cell. There must be some mechanism
of discrimination employed in these processes so that the correct
kinds of organic molecules come into the cell as nutrients, and the correct
kinds of organic molecules get expelled as wastes. The data being exchanged
in both cases are organic molecules. However, the cell processes can discriminate
and select which molecules are useful and which molecules are
harmful.
Second, these molecular biologists describe information as a communicative
process. This seems correct, as information is a kind of medium
between, on the one hand, something doing the communicating and, on
the other hand, something doing the receiving in some environment. In
other words, communication of information entails that there be some
kind of afferent entity and some kind of efferent entity, as well as some
kind of environment, in which this communication can occur. Insofar as
this is the case, information can be considered as a communication on the
part of some afferent entity (the communicator) that causes some kind of
a change or modifi cation in the efferent entity (the receiver) in an environment,
infl uencing the subsequent activity of the efferent entity. Using our
example of the eukaryotic cell, carbon, nitrogen, and oxygen molecules
(the communicator) pass by the plasma membrane (the receiver) and can
be understood as informative and incorporated into the body of the cell
as energy (the infl uence). Conversely, organic molecules that are expelled
as wastes by cell A (the communicator) can be understood as informative
for nearby cell B (the receiver), to the extent that cell B does not intake
cell A’s waste (the infl uence).
Third, it would seem that some kind of storage or imprinting mechanism
would need to exist in the receiver, even if this storage were to endure for
only a short amount of time. Such a storage mechanism is necessary so
that the information actually can be infl uential for the efferent entity. For
example, when a cell divides in two during cellular mitosis, the offspring
cell receives the genetic information from its parent cell. The genetic information
from an initial parent cell (or parent cells) is housed in every one
of the cells of a multicellular organism. This is why it is that biologists like
Gould (2002) and Dawkins (1976) can refer to organisms as “genetic information
houses.” If that information from the parent cell was not stored
somehow in the nucleolus of the offspring cell, then the offspring cell
could not continue to pass on genetic information in its own process of
mitosis.
Finally, afferent entities have the potential to become efferent entities,
although not in exactly the same respect, and vice versa: cells are generated
by mitosis but then generate their own mitosis, the plasma membrane
takes in but then expels organic molecules, the medulla of the brain
receives messages from and then sends messages to the heart and lungs, and drone bees perceive that food is present through the use of the visual
system and then communicate this information to the rest of the hive by
visual means. Organisms operate in such a way that information can be
readily communicated and accepted by the same systems, processes, and
traits. In this sense, there is a certain malleability or fl exibility to be found
in the subsystems and processes of an organism. Having both defi ned
information and described the conditions concerning information
exchange, we now can give a few more examples of this kind of activity
in organisms.
Example 1 Successful gene transfer in reproduction entails that genetic
information is passed along from parent organism to offspring organism.
The parent organism acts as the communicator, and the offspring as
receiver. The genetic code is the information that is communicated from
parent to organism. The offspring is affected by this genetic information,
since such information determines the offspring’s structure and activity.
The genetic information is stored in the deoxyribonucleic acid (DNA)
located in the nucleus of the cell and, in conjunction with environmental
factors, continually shapes the structure and activity of the organism
throughout its life span (Audesirk et al., 2002; Mayr, 1997; Voet, Voet, &
Pratt, 2002; Campbell & Reece, 1999).
Example 2 When a neuron produces an action potential—colloquially,
when it fi res—information associated with spiking signals is communicated
between that neuron and at least one other neuron. The axon of one
neuron, A, acts as a communicator, and the dendrites of another neuron,
B—to which the axon of neuron A is connected—acts as a receiver. Protein
synthesis in neurotransmitter release is the information that is communicated
between neurons. Depending on the amount and intensity of the
neurotransmitter emitted from the communicator neuron, the receiver
neuron may become excitatory, making it more likely to produce its own
action potential. Networks of neurons can fi re more quickly when they are
used more frequently, as if the information associated with the particular
network’s fi ring has been stored. The complex interworkings of trillions of
these connections throughout an animal with a complex nervous system
enable it to fi ght, fl ee, forage, feast, and so on (Kandel, Schwartz, & Jessell,
2000; Felleman & van Essen, 1991; Crick, 1994).
Example 3 Cells use energy, and one of the primary functions of the
mitochondrion of an animal cell is to produce energy for the cell by converting
sugars into a nucleic acid called adenosine triphosphate (ATP).
However, this can happen only if there is a line of communication between other organelles of the cell and the mitochondria themselves. ATP acts as
the material catalyst of information communicated between mitochondria
and other organelles. When there are low levels of ATP, the mitochondria
receive this information and convert more sugars; conversely, when sugars
are converted, the other organelles receive this information and cellular
homeostasis can be maintained (Audesirk et al., 2002; Voet et al., 2002;
Campbell & Reece, 1999).
Example 4 A clear illustration of the communication of information in a
systemic fashion is a mammal’s muscle coordination in a refl ex arc. In this
activity, information is communicated to and from the spinal cord and a
particular muscle group of the body (Kandel et al., 2000; Pelligrino, Fadiga,
Fogassi, Gallese, & Rizzolatti, 1996). Consider a situation where a very
curious cat decides to jump atop a very hot stove. The intense motion of
the molecules from the stovetop is impressed upon the pads of the cat’s
paws. That motion affects the sensory neurons in the cat’s skin, causing
them to fi re. The sensory neurons send a message to the interneurons
and, in turn, a message is sent through motor neurons to the spinal cord.
These messages consist of billions of action potentials and neurotransmitter
releases, affecting cell after cell along the pathway of this particular
refl ex arc. In an instant, the spinal cord then sends a message back to the
muscle groups associated with the cat’s legs, diaphragm, and back. In a
fl ash, the cat jumps off the stove and screams while arching its back.
However, now the cat must coordinate its fall to the ground. This time,
information is sent from the visual system to the brain and then back
through the spinal cord to other muscles in the cat’s body. All of this
information must be integrated by the brain and motor responses must be
orchestrated by the combined effort of brain–body communication of
information. The cat narrowly avoids falling into the garbage can placed
next to the stove.
We can now be more precise concerning the kind of activities in which
organisms are engaged. This fourth example not only helps to demonstrate
how information is communicated in organisms but also serves to bolster
the claim that organisms are hierarchically organized systems of information
exchange. This is so because information must fl ow between the subsystems
of the organism, as well as within the particularized processes of
the subsystems themselves, in order for an organized expression of the
organism’s activity to take place. Our curious cat utilized—at least—the
endocrine, nervous, muscular, respiratory, skeletal, and visual subsystems
in its body while jumping, screaming, and negotiating space. Similarly, for a euglena, there must be a fl ow of information between eyespot and fl agellum
in food acquisition, just as there must be a fl ow of information
between chloroplasts and plastids in food storage.
Raw data are exchanged between and among the various subsystems and
processes of the organism. However, not every piece of data is relevant
or useful to a subsystem or process. There must be some property of the
components of an organism that allows for discrimination or parsing
between relevant and irrelevant data. Once a piece of data has been selected
as useful for a process, it becomes informative for the process; the selected
data ceases to be potentially useful and becomes actual information. Raw
data have the potential to become information, and information can be
understood as data of the kind that have been selected for as useful for a
process or system in an organism. Thus, there are actually three categories
of data, namely, (1) data that are not of the kind that are either useful or
not useful for a subsystem or process, (2) data that are of the kind that are
not useful for a subsystem or process, and (3) data that are of the kind that
are useful for a subsystem or process, namely, information.
The term information can be defi ned in different ways, usually depending
upon the intended goals of a particular intellectual discipline or methodology
employed. Some molecular biologists use the term in the spirit of
Shannon (1948) and Weaver & Shannon’s (1949) information theory to
describe any general communicative process that selects one or more objects
from a set of objects (cf. Sacco, Copes, Sloyer, & Stark, 1988; Schneider,
1986; also the articles in Terzis & Arp, 2008). However, a few more conditions
should be added to this defi nition in order to make it more appropriate
for our discussion.
First, given the molecular biologist’s defi nition, I think it is correct to
say that information entails a selective process. As has been noted already,
it is the selective capacity of the components of an organism that enables
raw data to be considered as information. Consider that there are a multitude
of activities being performed by organelles within the eukaryotic cell.
The plasma membrane is the phospholipid bilayer that acts as the cell’s
shell. In the processes of endocytosis and exocytosis, materials are moved
into and out of the cell through the plasma membrane. However, not just
any material is allowed into or out of the cell. There must be some mechanism
of discrimination employed in these processes so that the correct
kinds of organic molecules come into the cell as nutrients, and the correct
kinds of organic molecules get expelled as wastes. The data being exchanged
in both cases are organic molecules. However, the cell processes can discriminate
and select which molecules are useful and which molecules are
harmful.
Second, these molecular biologists describe information as a communicative
process. This seems correct, as information is a kind of medium
between, on the one hand, something doing the communicating and, on
the other hand, something doing the receiving in some environment. In
other words, communication of information entails that there be some
kind of afferent entity and some kind of efferent entity, as well as some
kind of environment, in which this communication can occur. Insofar as
this is the case, information can be considered as a communication on the
part of some afferent entity (the communicator) that causes some kind of
a change or modifi cation in the efferent entity (the receiver) in an environment,
infl uencing the subsequent activity of the efferent entity. Using our
example of the eukaryotic cell, carbon, nitrogen, and oxygen molecules
(the communicator) pass by the plasma membrane (the receiver) and can
be understood as informative and incorporated into the body of the cell
as energy (the infl uence). Conversely, organic molecules that are expelled
as wastes by cell A (the communicator) can be understood as informative
for nearby cell B (the receiver), to the extent that cell B does not intake
cell A’s waste (the infl uence).
Third, it would seem that some kind of storage or imprinting mechanism
would need to exist in the receiver, even if this storage were to endure for
only a short amount of time. Such a storage mechanism is necessary so
that the information actually can be infl uential for the efferent entity. For
example, when a cell divides in two during cellular mitosis, the offspring
cell receives the genetic information from its parent cell. The genetic information
from an initial parent cell (or parent cells) is housed in every one
of the cells of a multicellular organism. This is why it is that biologists like
Gould (2002) and Dawkins (1976) can refer to organisms as “genetic information
houses.” If that information from the parent cell was not stored
somehow in the nucleolus of the offspring cell, then the offspring cell
could not continue to pass on genetic information in its own process of
mitosis.
Finally, afferent entities have the potential to become efferent entities,
although not in exactly the same respect, and vice versa: cells are generated
by mitosis but then generate their own mitosis, the plasma membrane
takes in but then expels organic molecules, the medulla of the brain
receives messages from and then sends messages to the heart and lungs, and drone bees perceive that food is present through the use of the visual
system and then communicate this information to the rest of the hive by
visual means. Organisms operate in such a way that information can be
readily communicated and accepted by the same systems, processes, and
traits. In this sense, there is a certain malleability or fl exibility to be found
in the subsystems and processes of an organism. Having both defi ned
information and described the conditions concerning information
exchange, we now can give a few more examples of this kind of activity
in organisms.
Example 1 Successful gene transfer in reproduction entails that genetic
information is passed along from parent organism to offspring organism.
The parent organism acts as the communicator, and the offspring as
receiver. The genetic code is the information that is communicated from
parent to organism. The offspring is affected by this genetic information,
since such information determines the offspring’s structure and activity.
The genetic information is stored in the deoxyribonucleic acid (DNA)
located in the nucleus of the cell and, in conjunction with environmental
factors, continually shapes the structure and activity of the organism
throughout its life span (Audesirk et al., 2002; Mayr, 1997; Voet, Voet, &
Pratt, 2002; Campbell & Reece, 1999).
Example 2 When a neuron produces an action potential—colloquially,
when it fi res—information associated with spiking signals is communicated
between that neuron and at least one other neuron. The axon of one
neuron, A, acts as a communicator, and the dendrites of another neuron,
B—to which the axon of neuron A is connected—acts as a receiver. Protein
synthesis in neurotransmitter release is the information that is communicated
between neurons. Depending on the amount and intensity of the
neurotransmitter emitted from the communicator neuron, the receiver
neuron may become excitatory, making it more likely to produce its own
action potential. Networks of neurons can fi re more quickly when they are
used more frequently, as if the information associated with the particular
network’s fi ring has been stored. The complex interworkings of trillions of
these connections throughout an animal with a complex nervous system
enable it to fi ght, fl ee, forage, feast, and so on (Kandel, Schwartz, & Jessell,
2000; Felleman & van Essen, 1991; Crick, 1994).
Example 3 Cells use energy, and one of the primary functions of the
mitochondrion of an animal cell is to produce energy for the cell by converting
sugars into a nucleic acid called adenosine triphosphate (ATP).
However, this can happen only if there is a line of communication between other organelles of the cell and the mitochondria themselves. ATP acts as
the material catalyst of information communicated between mitochondria
and other organelles. When there are low levels of ATP, the mitochondria
receive this information and convert more sugars; conversely, when sugars
are converted, the other organelles receive this information and cellular
homeostasis can be maintained (Audesirk et al., 2002; Voet et al., 2002;
Campbell & Reece, 1999).
Example 4 A clear illustration of the communication of information in a
systemic fashion is a mammal’s muscle coordination in a refl ex arc. In this
activity, information is communicated to and from the spinal cord and a
particular muscle group of the body (Kandel et al., 2000; Pelligrino, Fadiga,
Fogassi, Gallese, & Rizzolatti, 1996). Consider a situation where a very
curious cat decides to jump atop a very hot stove. The intense motion of
the molecules from the stovetop is impressed upon the pads of the cat’s
paws. That motion affects the sensory neurons in the cat’s skin, causing
them to fi re. The sensory neurons send a message to the interneurons
and, in turn, a message is sent through motor neurons to the spinal cord.
These messages consist of billions of action potentials and neurotransmitter
releases, affecting cell after cell along the pathway of this particular
refl ex arc. In an instant, the spinal cord then sends a message back to the
muscle groups associated with the cat’s legs, diaphragm, and back. In a
fl ash, the cat jumps off the stove and screams while arching its back.
However, now the cat must coordinate its fall to the ground. This time,
information is sent from the visual system to the brain and then back
through the spinal cord to other muscles in the cat’s body. All of this
information must be integrated by the brain and motor responses must be
orchestrated by the combined effort of brain–body communication of
information. The cat narrowly avoids falling into the garbage can placed
next to the stove.
We can now be more precise concerning the kind of activities in which
organisms are engaged. This fourth example not only helps to demonstrate
how information is communicated in organisms but also serves to bolster
the claim that organisms are hierarchically organized systems of information
exchange. This is so because information must fl ow between the subsystems
of the organism, as well as within the particularized processes of
the subsystems themselves, in order for an organized expression of the
organism’s activity to take place. Our curious cat utilized—at least—the
endocrine, nervous, muscular, respiratory, skeletal, and visual subsystems
in its body while jumping, screaming, and negotiating space. Similarly, for a euglena, there must be a fl ow of information between eyespot and fl agellum
in food acquisition, just as there must be a fl ow of information
between chloroplasts and plastids in food storage.